Stem-loop pab-MIR11445a

Accession

MI0036871

Description

Picea abies pab-MIR11445a precursor miRNA

Sequence

augaugaggcacuuugauuggcuagggaugaauuguugggauaccuagaugugcuucgaaauagcccucccgcuaauuuaacgaacacccgagagaugguggacuugauuaaaaggauguuggaugaggccaauaaucgaaacauauuggAUUUUAAUUUCACACUUGGGCugagugcuuuugaaucau
((((((((((((((.....(.(((((..((((..((((((((.((..((((((.(((((....(((((((.((...((((((((.((((........))))...))).))))).....)).))).).)))......))))).))))))))))))))))))))..))))).).)))))))))...)))))

Structure

     ---         ugauu g     ga    uu        a  ua      c     --aaua   - -   c  --uaa     -   --a    cga 
augau   gaggcacuu     g cuagg  ugaa  guugggau cc  gaugug uucga      gcc c ucc gc     uuuaa cga   cacc   g
|||||   |||||||||     | |||||  ||||  |||||||| ||  |||||| |||||      ||| | ||| ||     ||||| |||   ||||    
uacua   uuucgugag     C GGUUC  ACUU  UAAUUUUA gg  uuauac aagcu      cgg g agg ug     aaauu guu   gugg   a
     agu         ----u G     AC    --        -  --      a     aauaac   a u   u  uagga     a   cag    uag 

Annotation confidence Not enough data

Genome context

MA_163767: 10490-10678 [-]

Mature pab-miR11445a

• Accession: MIMAT0044969
• Description: Picea abies pab-miR11445a mature miRNA
• Sequence: 151 - AUUUUAAUUUCACACUUGGGC - 171
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918