Stem-loop pab-MIR11445b

Accession

MI0036872

Description

Picea abies pab-MIR11445b precursor miRNA

Sequence

augacaaggcacuuugauuggcuagggaugaauuguugggauaccuagaugugcuuugaaauaguccuccugcuacuuuaaugaacacucgagagaugguggaauugauuaaaaggauguuggaugaggccaauaauugacacauauuagAUUUUAAUUUCACACUUGGGCugagugcuuuugagucau
((((((((((((((.....(.(((((..((((..((((((((..(((((((((((((....(((((.(((.((((((((..(((....))))))).)))))))...)))))))))..((((((......)))))).....))))).))))))))))))))))..))))).).)))))))))...)))))

Structure

     ---         ugauu g     ga    uu        ac    -     -------------------------    gaaa     --c   u    -    aa   a 
augac   aaggcacuu     g cuagg  ugaa  guugggau  cuag augug                         cuuu    uaguc   ucc gcua cuuu  uga c
|||||   |||||||||     | |||||  ||||  ||||||||  |||| |||||                         ||||    |||||   ||| |||| ||||  |||  
uacug   uuucgugag     C GGUUC  ACUU  UAAUUUUA  gauu uacac                         gaaa    auuag   agg uggu gaga  gcu a
     agu         ----u G     AC    --        --    a     aguuaauaaccggaguagguuguag    ----     uua   -    a    --   c 

Annotation confidence Not enough data

Genome context

MA_8105426: 441-629 [-]

Mature pab-miR11445b

• Accession: MIMAT0044970
• Description: Picea abies pab-miR11445b mature miRNA
• Sequence: 151 - AUUUUAAUUUCACACUUGGGC - 171
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918