Stem-loop pab-MIR11447

Accession

MI0036875

Description

Picea abies pab-MIR11447 precursor miRNA

Sequence

129 reads, 13.0 reads per million, 36 experiments

aggaaaguuuccUGGAAAAAUACUGUGUAGGAGGuuuuggauguuucgaaacuuccuauagaguAUUUUUCCAGAAAACUUUCCU
((((((((((.(((((((((((((.((((((((((((((((...)))))))))))))))).))))))))))))).))))))))))

Structure

          c             G                u 
aggaaaguuu cUGGAAAAAUACU UGUAGGAGGuuuugga  
|||||||||| ||||||||||||| |||||||||||||||| g
UCCUUUCAAA GACCUUUUUAuga auauccuucaaagcuu  
          A             g                u 

Annotation confidence Low

Genome context

MA_275100: 3296-3380 [-]

Mature pab-miR11447-5p

• Accession: MIMAT0057674
• Description: Picea abies pab-miR11447-5p mature miRNA
• Sequence: 13 - UGGAAAAAUACUGUGUAGGAGG - 34
• Evidence: experimental ; unknown

Mature pab-miR11447-3p

• Accession: MIMAT0044973
• Description: Picea abies pab-miR11447-3p mature miRNA
• Sequence: 65 - AUUUUUCCAGAAAACUUUCCU - 85
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918