Stem-loop pab-MIR11450

Accession

MI0036878

Description

Picea abies pab-MIR11450 precursor miRNA

Sequence

guaagucaggguuacacaugccuCAAGUGGAACUAGUUAGCGCUaauggucuucuaaucuuauuguugaucuccaaguuauguuuaaggggggauguuggaaccuuguaaugguuaguaaacccaacuuguaguagauguaggcacaucguguggauuaguaugaugcuuaauugacaugugugaugguggcuagugcauugacauguuggauagugcauugggcagauugaagaccauuggagcugacuagguccacuugaggcauguguaaccuugacuuau
(((((((((((((((((((((((((((((((.(((((((((.((((((((((((.(((((........((((((...(((....)))..))))))(((((((((.......)))).......)))))................((((.(((((.((((((((...))).))))).))))))))).....(.(((((((((((.((...))..))))))))))).)))))))))))))))))).))))))))).)))))))))))))))))))))))))))))))

Structure

                               A         G            u     uauuguugaucuccaaguuauguuuaaggggggauguuggaaccuuguaaugguuaguaaacccaacuuguaguagauguagg    u     g     -   u 
guaagucaggguuacacaugccuCAAGUGGA CUAGUUAGC CUaauggucuuc aaucu                                                                                   caca cgugu gauua gua  
||||||||||||||||||||||||||||||| ||||||||| |||||||||||| |||||                                                                                   |||| ||||| ||||| ||| g
uauucaguuccaauguguacggaguucaccu gaucagucg gguuaccagaag uuaga                                                                                   gugu guaca uuaau cgu  
                               g         a            -     ------------------------------------------cggguuacgugauagguuguacaguuacgugaucgguggua    -     g     u   a 

Annotation confidence Not enough data

Genome context

MA_116694: 2105-2388 [-]

Mature pab-miR11450

• Accession: MIMAT0044976
• Description: Picea abies pab-miR11450 mature miRNA
• Sequence: 24 - CAAGUGGAACUAGUUAGCGCU - 44
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918