Stem-loop pab-MIR11452

Accession

MI0036880

Description

Picea abies pab-MIR11452 precursor miRNA

Sequence

agauugguuggcgugguUGGGAGCGAUCGAUGAGGUGUUugcuucuuuccuucuggugaugcccuucuugcccuugcccuugaagguucguucauuccgaaggaaaaauaugcagaacaccugaucgaucuucccaccuacaccaacgccaucu
((((.((((((.((((.((((((.(((((((.((((((((((...((((((((.(((((((.(((((..((....))....)))))..)).)))))..)))))))).....)))).)))))).))))))))))))).)))).))))).).))))

Structure

    u -     c    u      C       G      -    --uuc        -u     -  -c     --uu  c 
agau g guugg gugg UGGGAG GAUCGAU AGGUGU Uugc     uuuccuuc  gguga ug  ccuuc    gc c
|||| | ||||| |||| |||||| ||||||| |||||| ||||     ||||||||  ||||| ||  |||||    ||  
ucua c caacc cauc acccuu cuagcua uccaca gacg     aaaggaag  uuacu gc  ggaag    cg u
    c g     a    c      -       g      a    uauaa        cc     u  uu     uucc  u 

Annotation confidence Not enough data

Genome context

MA_180445: 17696-17849 [-]

Mature pab-miR11452

• Accession: MIMAT0044978
• Description: Picea abies pab-miR11452 mature miRNA
• Sequence: 18 - UGGGAGCGAUCGAUGAGGUGUU - 39
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918