miRBase entry: pab-MIR3710i

Stem-loop pab-MIR3710i


Accession
MI0036884
Description
Picea abies pab-MIR3710i precursor miRNA


Sequence

10066 reads, 864.0 reads per million, 99 experiments
agcacccgccCAGGUCAAGACUUUGGAGGuccgucgguugggagaucguccgcagaguggagcacccgccCAGGUCAAGACUUUGGAGGCCcgu
.....((.((.(((((..(((((.((.((((((.(..((((((.....))).))).)))))....)).)).)))))..))))).)).)).....

Structure
agcac  g  C     AA     U  A  ----    u gg   -   g 
     cc cc AGGUC  GACUU GG GG    uccg c  uug gga a
     || || |||||  ||||| || ||    |||| |  ||| ||| u
     GG GG UUCAG  CUGGA cc cc    aggu g  gac ccu c
ugcCC  A  U     AA     C  g  cacg    - -a   g   g 


Annotation confidence Low
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Genome context
MA_10253211: 31-124 [+]

Database links

Mature pab-miR3710i-5p

Accession MIMAT0057681
Description Picea abies pab-miR3710i-5p mature miRNA
Sequence 11 - CAGGUCAAGACUUUGGAGG - 29
Evidence experimental
unknown

Mature pab-miR3710i-3p

Accession MIMAT0044982
Description Picea abies pab-miR3710i-3p mature miRNA
Sequence 71 - CAGGUCAAGACUUUGGAGGCC - 91
Evidence experimental
Illumina [1]

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918