Stem-loop pab-MIR11456

Accession

MI0036886

Description

Picea abies pab-MIR11456 precursor miRNA

Sequence

gcauaugcuuaaauauuuuuuccaaggcuuuaauugaaggacacggggugggauuugauccacuuauguguguauggcucucaagaucauuuaauauagucucuuuggaucaaaucccacucCAUGUCCUUCGAUUAAAGCCUuggaaaaaaauauuuaaacauaugu
(((((((.(((((((((((((((((((((((((((((((((((.((((((((((((((((((....(((((..((((((....)).))))...))))).......)))))))))))))))))).)))))))))))))))))))))).))))))))))))).)))))))

Structure

       c             -                      c                  ---cuua     -gu    -  c 
gcauaug uuaaauauuuuuu ccaaggcuuuaauugaaggaca ggggugggauuugaucca       ugugu   augg cu u
||||||| ||||||||||||| |||||||||||||||||||||| ||||||||||||||||||       |||||   |||| ||  
uguauac aauuuauaaaaaa gguUCCGAAAUUAGCUUCCUGU Ccucacccuaaacuaggu       auaua   uacu ga c
       a             a                      A                  uucucug     auu    a  a 

Annotation confidence Not enough data

Genome context

MA_9842533: 136-303 [-]

Mature pab-miR11456

• Accession: MIMAT0044984
• Description: Picea abies pab-miR11456 mature miRNA
• Sequence: 123 - CAUGUCCUUCGAUUAAAGCCU - 143
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918