Stem-loop pab-MIR11458

Accession

MI0036890

Description

Picea abies pab-MIR11458 precursor miRNA

Sequence

73 reads, 14.0 reads per million, 18 experiments

uugCCAGACAGUAUGAAAAGCAGUaaauggcuauccaaagccuccUGCUAUUCAUACUGCCUGGCAa
.((((((.(((((((((.(((((.....((((......))))..))))).))))))))).)))))).

Structure

u      A         A     Uaaau    au 
 ugCCAG CAGUAUGAA AGCAG     ggcu  c
 |||||| ||||||||| |||||     ||||   
 ACGGUC GUCAUACUU UCGUc     ccga  c
a      C         A     ---cu    aa 

Annotation confidence High

Genome context

MA_6394759: 2107-2173 [+]

Mature pab-miR11458-5p

• Accession: MIMAT0044988
• Description: Picea abies pab-miR11458-5p mature miRNA
• Sequence: 4 - CCAGACAGUAUGAAAAGCAGU - 24
• Evidence: experimental ; Illumina [1]

Mature pab-miR11458-3p

• Accession: MIMAT0057683
• Description: Picea abies pab-miR11458-3p mature miRNA
• Sequence: 46 - UGCUAUUCAUACUGCCUGGCA - 66
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918