Stem-loop pab-MIR11423b

Accession

MI0036892

Description

Picea abies pab-MIR11423b precursor miRNA

Sequence

195 reads, 48.0 reads per million, 63 experiments

acugguacggaCGAGAAACGUCGCCGGUCGUAuuguacgacguuuccaaaucgaGAAACGCCGUACGGUACGaccgacgauguuucucggccauacuguaccugu
((.(((((((.((((((((((((.(((((((((((((((.((((((........)))))).))))))))))))))).)))))))))))).)).....))))).))

Structure

  u     -----  a            C               a      caa 
ac gguac     gg CGAGAAACGUCG CGGUCGUAuuguacg cguuuc   a
|| |||||     || |||||||||||| ||||||||||||||| ||||||    
ug ccaug     cc gcucuuuguagc gccaGCAUGGCAUGC GCAAAG   u
  u     ucaua  g            a               C      agc 

Annotation confidence Low

Genome context

MA_8303833: 2389-2493 [-]

Mature pab-miR11423b-5p

• Accession: MIMAT0044990
• Description: Picea abies pab-miR11423b-5p mature miRNA
• Sequence: 12 - CGAGAAACGUCGCCGGUCGUA - 32
• Evidence: experimental ; Illumina [1]

Mature pab-miR11423b-3p

• Accession: MIMAT0057684
• Description: Picea abies pab-miR11423b-3p mature miRNA
• Sequence: 55 - GAAACGCCGUACGGUACG - 72
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918