Stem-loop pab-MIR11460

Accession

MI0036894

Description

Picea abies pab-MIR11460 precursor miRNA

Sequence

uucaagcaaauugcuguagaaauugCGAGCGCUUCAAAGAGAAGAAGagcacaacguggcagaaauugugggaauguagaaauugcaagcacuucaaagagaagaauaacacaacauggcagaaacugcgagaagaaagcacuugaagagaaaaacaauugacacuuuguggucuuuuucucuuuggaagugguagcagguuuuauagcgauuuuguagaa
.....((((((((((((((((.((((.(.(((((((((((((((((((.(((((.(((.....((((((..(..((((.....))))..).((((.....))))............(.((((...)))).).(((......)))..........))))))..))).))))).))))))))))))).)))))).).)))).))))))))))).)))))....

Structure

uucaa     -           a    G G      -             g     c   gcaga      --------------------------------------------------------------gg aa    g 
     gcaaa uugcuguagaa uugC A CGCUUC AAAGAGAAGAAGa cacaa gug     aauugu                                                                g  ugua a
     ||||| ||||||||||| |||| | |||||| ||||||||||||| ||||| |||     ||||||                                                                |  |||| a
     uguuu agcgauauuuu gacg u gugaag uuucucuuuuucu guguu cac     uuaaca                                                                c  acgu a
-aaga     u           g    a g      g             g     u   ---ag      aaaagagaaguucacgaaagaagagcgucaaagacgguacaacacaauaagaagagaaacuuca ga    u 

Annotation confidence Not enough data

Genome context

MA_561617: 1808-2028 [-]

Mature pab-miR11460

• Accession: MIMAT0044992
• Description: Picea abies pab-miR11460 mature miRNA
• Sequence: 26 - CGAGCGCUUCAAAGAGAAGAAG - 47
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918