Stem-loop pab-MIR11461

Accession

MI0036895

Description

Picea abies pab-MIR11461 precursor miRNA

Sequence

717 reads, 525.0 reads per million, 24 experiments

ccgcugcuuCUGGCGGAUCCUCCAAAUCUGgcaagggCGAGGAGGAGAGCUAAGAGCCggga
(((..((((.((((...((((((...(((....)))....))))))..)))).)))))))..

Structure

--   cu    C    GGA      -AAA   G 
  ccg  gcuu UGGC   UCCUCC    UCU g
  |||  |||| ||||   ||||||    |||  
  ggC  CGAG AUCG   AGGAGG    gga c
ag   --    A    -AG      AGCg   a 

Annotation confidence Medium

Genome context

MA_22203: 9300-9361 [-]

Mature pab-miR11461-5p

• Accession: MIMAT0057685
• Description: Picea abies pab-miR11461-5p mature miRNA
• Sequence: 10 - CUGGCGGAUCCUCCAAAUCUG - 30
• Evidence: experimental ; unknown

Mature pab-miR11461-3p

• Accession: MIMAT0044993
• Description: Picea abies pab-miR11461-3p mature miRNA
• Sequence: 38 - CGAGGAGGAGAGCUAAGAGCC - 58
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918