Stem-loop pab-MIR11423i

Accession

MI0036903

Description

Picea abies pab-MIR11423i precursor miRNA

Sequence

196 reads, 39.0 reads per million, 58 experiments

gccgaaacggguacgguacggccccgaaacgccacuggcCGUACCGUACGGCGUUUCucgaaagggaaacgccauacgguaCGGCCGGUGGCGUUUCGGGGCcguaccgugcucguauggc
((((..((((((((((((((((((((((((((((((((((((((((((.((((((((((....)))))))))).)))))))))))))))))))))))))))))))))))))))))).))))

Structure

    aa                                          C          g 
gccg  acggguacgguacggccccgaaacgccacuggcCGUACCGUA GGCGUUUCuc a
||||  |||||||||||||||||||||||||||||||||||||||||| ||||||||||  
cggu  ugcucgugccaugcCGGGGCUUUGCGGUGGCCGGCauggcau ccgcaaaggg a
    -a                                          a          a 

Annotation confidence Low

Genome context

MA_9161156: 142-262 [+]

Mature pab-miR11423i-5p

• Accession: MIMAT0057688
• Description: Picea abies pab-miR11423i-5p mature miRNA
• Sequence: 40 - CGUACCGUACGGCGUUUC - 57
• Evidence: experimental ; unknown

Mature pab-miR11423i-3p

• Accession: MIMAT0045001
• Description: Picea abies pab-miR11423i-3p mature miRNA
• Sequence: 82 - CGGCCGGUGGCGUUUCGGGGC - 102
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918