Stem-loop pab-MIR11466a

Accession

MI0036909

Description

Picea abies pab-MIR11466a precursor miRNA

Sequence

3364 reads, 200.0 reads per million, 93 experiments

uacucucgacCUCCACAAGAGAUUUGUUCUCugguggaaggucuucugaaccauagaGAAUAAGUCUCUUGUGGAAGUuaagagua
((((((.(((.((((((((((((((((((((((.(((..((....))...))))))))))))))))))))))))).))).))))))

Structure

      c   C                      g   -aa  u 
uacucu gac UCCACAAGAGAUUUGUUCUCug ugg   gg c
|||||| ||| |||||||||||||||||||||| |||   ||  
augaga uUG AGGUGUUCUCUGAAUAAGagau acc   uc u
      a   A                      -   aag  u 

Annotation confidence High

Genome context

MA_40097: 6227-6312 [+]

Mature pab-miR11466a-5p

• Accession: MIMAT0045007
• Description: Picea abies pab-miR11466a-5p mature miRNA
• Sequence: 11 - CUCCACAAGAGAUUUGUUCUC - 31
• Evidence: experimental ; Illumina [1]

Mature pab-miR11466a-3p

• Accession: MIMAT0057691
• Description: Picea abies pab-miR11466a-3p mature miRNA
• Sequence: 58 - GAAUAAGUCUCUUGUGGAAGU - 78
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918