Stem-loop pab-MIR11468

Accession

MI0036912

Description

Picea abies pab-MIR11468 precursor miRNA

Sequence

516 reads, 124.0 reads per million, 38 experiments

gagguguguggauugcUGUUUCAGUGAAAAUCCAGUGugguggagcgcgugcuuuuccuuagguaaggaaaagcacgcgcuccacuacaCUGGAUUUUCAUUAGAACAGCgguccacgcaccuc
(((((((((((((((((((((.((((((((((((((((((((((((((((((((((((((....)))))))))))))))))))))))))))))))))))))).)))))))))))))))))))))

Structure

                     C                                      a 
gagguguguggauugcUGUUU AGUGAAAAUCCAGUGugguggagcgcgugcuuuuccuu g
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||  
cuccacgcaccuggCGACAAG UUACUUUUAGGUCacaucaccucgcgcacgaaaaggaa g
                     A                                      u 

Annotation confidence Medium

Genome context

MA_393985: 135-258 [+]

Mature pab-miR11468-5p

• Accession: MIMAT0057694
• Description: Picea abies pab-miR11468-5p mature miRNA
• Sequence: 17 - UGUUUCAGUGAAAAUCCAGUG - 37
• Evidence: experimental ; unknown

Mature pab-miR11468-3p

• Accession: MIMAT0045010
• Description: Picea abies pab-miR11468-3p mature miRNA
• Sequence: 90 - CUGGAUUUUCAUUAGAACAGC - 110
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918