Stem-loop pab-MIR11472

Accession

MI0036916

Description

Picea abies pab-MIR11472 precursor miRNA

Sequence

uuaugaacuuaauccacguugucaccaugaaucgagagaaaaacgacucuaguaaugugaaucuaggaauuaguuuugcgaaaacaguguuauaguuugagacuacugaugucgcaugcgaugaaacugugacguuacuagagccaCUUUUCUCUCGAUUCUUGGUGgaacauuggguugaacucguaa
.(((((..((((((((.(((.((((((.((((((((((((((..(.((((((((((((.(...(((......((..(((((...(((((((.........))).))))...))))).)).......)))).)))))))))))).)..)))))))))))))).)))))))))..))))))))..))))).

Structure

u     ac        -c   g      u              ac a            g auc   -gaauua  uu     aaa    -   aua 
 uauga  uuaaucca  guu ucacca gaaucgagagaaaa  g cucuaguaaugu a   uag       gu  ugcga   cagu guu   g
 |||||  ||||||||  ||| |||||| ||||||||||||||  | |||||||||||| |   |||       ||  |||||   |||| |||   u
 augcu  aguugggu  caa gGUGGU CUUAGCUCUCUUUU  c gagaucauugca u   guc       cg  acgcu   guca cag   u
a     ca        ua   -      U              Ca c            g ---   aaaguag  -u     gua    u   agu 

Annotation confidence Not enough data

Genome context

MA_126473: 9228-9416 [-]

Mature pab-miR11472

• Accession: MIMAT0045014
• Description: Picea abies pab-miR11472 mature miRNA
• Sequence: 147 - CUUUUCUCUCGAUUCUUGGUG - 167
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918