Stem-loop pab-MIR11474

Accession

MI0036918

Description

Picea abies pab-MIR11474 precursor miRNA

Sequence

cacuggcagauacauucaccauuuucgacagguuauccacucauuuuaaaaaucaaagugccauuaaggaacccGAGAAUCGCUGGAGAUACCUGccgaug
...((((((.((..(((((.(((((((...(((..(((...((((((.......)))))).......))))))))))))).).))))..)).))))))...

Structure

cac      a  ca    - c       aca   ua   ----acu      aa 
   uggcag ua  uuca c auuuucg   ggu  ucc       cauuuu  a
   |||||| ||  |||| | |||||||   |||  |||       ||||||  a
   gccGUC AU  AGGU G UAAGAGc   cca  agg       gugaaa  a
gua      C  AG    C C       ---   --   aauuacc      cu 

Annotation confidence Not enough data

Genome context

MA_5156669: 136-236 [+]

Mature pab-miR11474

• Accession: MIMAT0045016
• Description: Picea abies pab-miR11474 mature miRNA
• Sequence: 75 - GAGAAUCGCUGGAGAUACCUG - 95
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918