Stem-loop pab-MIR11411b

Accession

MI0036927

Description

Picea abies pab-MIR11411b precursor miRNA

Sequence

gguagaaguacagagugucgcugugccaagaaugauuugcccacaauuacagacgcgaccuacuuguugcaguuagauuguagaauggcaacuaauuguaggccggcggccacucuauucaauaacggaaucggacugguuuguGGGUAAAUUGUCUUGGCACAGcaacccgaugugcuugucaagcc
((((.(((((((..(.((.((((((((((((.((((((((((((((...(((.(.(((((.......(((((((((.((((......)))))))))))))((((...))))...............))..)))).)))..)))))))))))))))))))))))))).)).)..))))))).)...)))

Structure

   --- g       ga u  c            a              uua   a g   --  -------------------uacuugu         a    ag 
ggu   a aaguaca  g gu gcugugccaaga ugauuugcccacaa   cag c cga  cc                          ugcaguuag uugu  a
|||   | |||||||  | || |||||||||||| ||||||||||||||   ||| | |||  ||                          ||||||||| ||||   
ccg   u uucgugu  c ca cGACACGGUUCU GUUAAAUGGGuguu   guc g gcu  gg                          auguuaauc aacg  a
   aac g       ag c  a            -              -ug   a -   aa  caauaacuuaucucaccggcggccgg         -    gu 

Annotation confidence Not enough data

Genome context

MA_32061: 31269-31456 [-]

Mature pab-miR11411b

• Accession: MIMAT0045025
• Description: Picea abies pab-miR11411b mature miRNA
• Sequence: 145 - GGGUAAAUUGUCUUGGCACAG - 165
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918