Stem-loop pab-MIR11481a

Accession

MI0036928

Description

Picea abies pab-MIR11481a precursor miRNA

Sequence

gcagcccgucagcugugagcuucgaucgucucgaugcgcuuggacucccgcaguucccacaccuucgcgcuuuuauaccacgaucgggccguggaaagugugggaccugguggaguccaaGUGCAUCGAGACGGUCGGAAGCucacagcugaggccgu
((.(((..((((((((((((((((((((((((((((((((((((((((..(((.((((((((.(((((((((.............))).))))))..)))))))).)))..))))))))))))))))))))))))).)))))))))))))))))).))

Structure

  a   cg               -                         cg   u        -c      -   uuaua 
gc gcc  ucagcugugagcuuc gaucgucucgaugcgcuuggacucc  cag ucccacac  uucgcg cuu     c
|| |||  ||||||||||||||| |||||||||||||||||||||||||  ||| ||||||||  |||||| |||     c
ug cgg  agucgacacuCGAAG CUGGCAGAGCUACGUGaaccugagg  guc agggugug  aggugc ggg     a
  c   --               G                         ug   c        aa      c   cuagc 

Annotation confidence Not enough data

Genome context

MA_170865: 11115-11272 [-]

Mature pab-miR11481a

• Accession: MIMAT0045026
• Description: Picea abies pab-miR11481a mature miRNA
• Sequence: 121 - GUGCAUCGAGACGGUCGGAAGC - 142
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918