Stem-loop pab-MIR3627i

Accession

MI0036931

Description

Picea abies pab-MIR3627i precursor miRNA

Sequence

guggaguauaggaggcagugcuguguuucuggcgcagacgagaugacacuguccucauauauccugaucauucauugaguuugcgaugaagaaggaauaaauauauaaaggcaGUGUCAUUUCUCUGCGCCUGAaaccuccuguuccuguaaaucuau
(((((.((((((((.(((.(..(.(((((.((((((((.((((((((((((((...(((((((((..((.(((((((......))))))))))))).....)))))...)))))))))))))))))))))).)))))).))))))))))))..)))))

Structure

     -g        g   u cu u     u        c              cuc     -----    ga  a       ag 
gugga  uauaggag cag g  g guuuc ggcgcaga gagaugacacuguc   auaua     uccu  uc uucauug  u
|||||  |||||||| ||| |  | ||||| |||||||| ||||||||||||||   |||||     ||||  || |||||||   
uaucu  auguccuu guc c  c caaAG CCGCGUCU CUUUACUGUGacgg   uauau     agga  ag aaguagc  u
     aa        -   - -u -     U        -              aaa     aaaua    --  -       gu 

Annotation confidence Not enough data

Genome context

MA_457712: 3325-3482 [-]

Mature pab-miR3627i

• Accession: MIMAT0045029
• Description: Picea abies pab-miR3627i mature miRNA
• Sequence: 114 - GUGUCAUUUCUCUGCGCCUGA - 134
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918