Stem-loop pab-MIR11431c

Accession

MI0036935

Description

Picea abies pab-MIR11431c precursor miRNA

Sequence

64210 reads, 1826.0 reads per million, 102 experiments

cauguUAACUAAUGCAUUCAACUGUCCaauaucugaagaacuaagaaaguugucaugaaugaaucuuacaggauuggcauuugagcauauuggACAGUUGAAUGAUUAGUUAACgug
(((((((((((((.((((((((((((((((((((.(((............(((((....((.......))....)))))))).)).)))))))))))))))))))))))))))))))

Structure

             G                  -  g   aacuaagaaagu     ugaa  aa 
cauguUAACUAAU CAUUCAACUGUCCaauau cu aag            uguca    ug  u
||||||||||||| |||||||||||||||||| || |||            |||||    ||  c
gugCAAUUGAUUA GUAAGUUGACAgguuaua ga uuu            acggu    ac  u
             -                  c  g   ------------     uagg  au 

Annotation confidence High

Genome context

MA_91269: 27701-27817 [-]

Mature pab-miR11431c-5p

• Accession: MIMAT0045033
• Description: Picea abies pab-miR11431c-5p mature miRNA
• Sequence: 6 - UAACUAAUGCAUUCAACUGUCC - 27
• Evidence: experimental ; Illumina [1]

Mature pab-miR11431c-3p

• Accession: MIMAT0057706
• Description: Picea abies pab-miR11431c-3p mature miRNA
• Sequence: 94 - ACAGUUGAAUGAUUAGUUAAC - 114
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918