Stem-loop pab-MIR11486

Accession

MI0036942

Description

Picea abies pab-MIR11486 precursor miRNA

Sequence

4688 reads, 288.0 reads per million, 97 experiments

guccacuauuccgaucuucUACCUGGAACUUUGAUAUCuggacacgcaucaacguuccaugUAGAGAAUCUGCAUGGUGGAC
(((((((((.(.(((.((((((.((((((.(((((...((....)).))))).)))))).)))))).))).).)))))))))

Structure

         u c   c      C      U     AUC  g 
guccacuau c gau uucUAC UGGAAC UUGAU   ug a
||||||||| | ||| |||||| |||||| |||||   ||  
CAGGUGGUA G CUA GAGAUg accuug aacua   gc c
         C U   A      u      c     --c  a 

Annotation confidence Low

Genome context

MA_6622: 33141-33222 [-]

Mature pab-miR11486-5p

• Accession: MIMAT0057712
• Description: Picea abies pab-miR11486-5p mature miRNA
• Sequence: 20 - UACCUGGAACUUUGAUAUC - 38
• Evidence: experimental ; unknown

Mature pab-miR11486-3p

• Accession: MIMAT0045040
• Description: Picea abies pab-miR11486-3p mature miRNA
• Sequence: 62 - UAGAGAAUCUGCAUGGUGGAC - 82
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918