Stem-loop pab-MIR11497

Accession

MI0036956

Description

Picea abies pab-MIR11497 precursor miRNA

Sequence

gcaagggauaucagccaUGAACAAGUUGUGUGGAUAUCaacgucuuacagguugcgccaacgugcauaguccgauauauaugcgcacauacgucccacagcacacccuguaaaguguugguaucugcucaauuuguucauggcagacaucccuugc
(((((((((.((.(((((((((((((((.(((((((((((((..(((((((.((.((....(((((((..........)))))))((....))......)).)).)))))))..))))))))))))).))))))))))))))).)).)))))))))

Structure

         a  a               U             uc       u  c  ----------caac       gucc 
gcaagggau uc gccaUGAACAAGUUG GUGGAUAUCaacg  uuacagg ug gc              gugcaua    g
||||||||| || ||||||||||||||| |||||||||||||  ||||||| || ||              |||||||     
cguucccua ag cgguacuuguuuaac cgucuaugguugu  aaugucc ac cg              cgcguau    a
         c  a               u             ga       c  a  acacccugcauaca       auau 

Annotation confidence Not enough data

Genome context

MA_224220: 3994-4149 [-]

Mature pab-miR11497

• Accession: MIMAT0045054
• Description: Picea abies pab-miR11497 mature miRNA
• Sequence: 18 - UGAACAAGUUGUGUGGAUAUC - 38
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918