Accession
MI0036960
Description
Picea abies
pab-MIR11500 precursor miRNA
Sequence
4205
reads,
152.0
reads per million, 92 experiments
agaacaugggcaaggaucauugaugaagccucgcagGUCUGCAGGAGGGCAUGGAAUuucauacccacauauuaacauaaacuuaaaugagaacuggacuccuuccaagagugauggacuggacuggaggguuggugggagagcagaacaaagccaaaugaaugaaugauguggagcaugaaucucUAUGCCUGCUUGUAGAUCUGUUagguuuuuuaugccuugcuucuucu
((((...((((((((..(((....(((((((.(((((((((((((.(((((((((..(((((.(((((((.....(((...............(((..(((((.((((......(((......))).....)))).)))))..)))...............)))....)))))).).)))))..))))))))).))))))))))))).)))))))..))))))))))).))))
((((...((((((((..(((....(((((((.(((((((((((((.(((((((((..(((((.(((((((.....(((...............(((..(((((.((((......(((......))).....)))).)))))..)))...............)))....)))))).).)))))..))))))))).))))))))))))).)))))))..))))))))))).))))
Structure
cau au ugau c A AU a - auuaa aaacuuaaaugagaa ga u gaguga ac
agaa gggcaagg cau gaagccu gcagGUCUGCAGG GGGCAUGGA uucau c ccacau cau cug cuccu ccaa ugg u
|||| |||||||| ||| ||||||| ||||||||||||| ||||||||| ||||| | |||||| ||| ||| ||||| |||| |||
ucuu uucguucc gua uuuugga UGUCUAGAUGUUC UCCGUAUcu aagua g ggugua gua gac gaggg gguu guc g
--c -- --uu U G cu c a -guaa aguaaaccgaaacaa ga u -gggag ag
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
MA_8333: 31687-31919 [-]
Database links
Mature pab-miR11500-5p
| Accession | MIMAT0057728 |
| Description | Picea abies pab-miR11500-5p mature miRNA |
| Sequence | 37 - GUCUGCAGGAGGGCAUGGAAU - 57 |
| Evidence |
experimental
unknown |
Mature pab-miR11500-3p
| Accession | MIMAT0045058 |
| Description | Picea abies pab-miR11500-3p mature miRNA |
| Sequence | 187 - UAUGCCUGCUUGUAGAUCUGUU - 208 |
| Evidence |
experimental
Illumina [1] |
References
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