Stem-loop pab-MIR11508

Accession

MI0036968

Description

Picea abies pab-MIR11508 precursor miRNA

Sequence

319 reads, 59.0 reads per million, 59 experiments

uagccuucuagaUCACUGAAGAAUUAUGCCACUuuuuguguggagaucugauucauucaaaaaguggcauaaUUCUUUAGUGAUCUGGAAGGCUa
((((((((((((((((((((((((((((((((((((((.(((((.......))))).))))))))))))))))))))))))))))))))))))))

Structure

                                      u     ga 
uagccuucuagaUCACUGAAGAAUUAUGCCACUuuuug gugga  u
|||||||||||||||||||||||||||||||||||||| |||||  c
aUCGGAAGGUCUAGUGAUUUCUUaauacggugaaaaac uacuu  u
                                      u     ag 

Annotation confidence Low

Genome context

MA_9965659: 1600-1694 [-]

Mature pab-miR11508-5p

• Accession: MIMAT0045066
• Description: Picea abies pab-miR11508-5p mature miRNA
• Sequence: 13 - UCACUGAAGAAUUAUGCCACU - 33
• Evidence: experimental ; Illumina [1]

Mature pab-miR11508-3p

• Accession: MIMAT0057735
• Description: Picea abies pab-miR11508-3p mature miRNA
• Sequence: 73 - UUCUUUAGUGAUCUGGAAGGCU - 94
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918