Accession
MI0036972
Description
Picea abies
pab-MIR11498c precursor miRNA
Sequence
9984
reads,
441.0
reads per million, 99 experiments
CAUGUCAUAUUACAUCACgaaugcaauugcuggaaauagaacaaauuuggcagcaaguagaguguuaugacauuauuuugaagcuucaguacuuucuggaguuuacaaaccuggucgucaaauaucaauccauccaccacucugauaagaacauagaccacccaucgccacuuuuggggaaaaccaucuuugucuaaccagauuguaUCAGUGAUGUAGUAUGACAUG
((((((((((((((((((..(((((((..((((...((((.((((..(((..........(((((....)))))..(((((((((((((......))))))))).))))..(((((......(((((...............)))))........)))))((((..........)))).....)))..)))))))).)))))))))))..))))))))))))))))))
((((((((((((((((((..(((((((..((((...((((.((((..(((..........(((((....)))))..(((((((((((((......))))))))).))))..(((((......(((((...............)))))........)))))((((..........)))).....)))..)))))))).)))))))))))..))))))))))))))))))
Structure
ga ug aaa a uu ------------------------------------------------cagcaaguagaguguuaugacauuau - ua
CAUGUCAUAUUACAUCAC augcaau cugg uaga caaa ugg uuug aagcuucag c
|||||||||||||||||| ||||||| |||| |||| |||| ||| |||| |||||||||
GUACAGUAUGAUGUAGUG Uauguua gacc aucu guuu acc aaac uuugagguc u
AC -- --a - cu aaaagggguuuucaccgcuacccaccagauacaagaauagucucaccaccuaccuaacuauaaacugcuggucc a uu
Annotation confidence
Medium
Do you think this miRNA is real?
Genome context
MA_121212: 11698-11925 [+]
Database links
Mature pab-miR11498c-5p
| Accession | MIMAT0057739 |
| Description | Picea abies pab-miR11498c-5p mature miRNA |
| Sequence | 1 - CAUGUCAUAUUACAUCAC - 18 |
| Evidence |
experimental
unknown |
Mature pab-miR11498c-3p
| Accession | MIMAT0045070 |
| Description | Picea abies pab-miR11498c-3p mature miRNA |
| Sequence | 208 - UCAGUGAUGUAGUAUGACAUG - 228 |
| Evidence |
experimental
Illumina [1] |
References
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