miRBase entry: pab-MIR11466b

Stem-loop pab-MIR11466b


Accession
MI0036976
Description
Picea abies pab-MIR11466b precursor miRNA


Sequence

966921 reads, 25666.0 reads per million, 102 experiments
uuacucUCCACCUCCACAAGACACUUGuuuucuugaaaagacguucugucuggaccuagaGAACAAGUGUCUUAUGGAUGUUGagaguaa
.(((((((.((.((((.((((((((((((((((.....((((.....))))......)))))))))))))))).)))).)).))))))).

Structure
u       C  C    C                -ugaaa    g 
 uacucUC AC UCCA AAGACACUUGuuuucu      agac u
 ||||||| || |||| ||||||||||||||||      |||| u
 augagaG UG AGGU UUCUGUGAACAAGaga      ucug c
a       U  U    A                uccagg    u 


Annotation confidence Low
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Genome context
MA_5116: 22926-23015 [-]

Database links

Mature pab-miR11466b-5p

Accession MIMAT0045074
Description Picea abies pab-miR11466b-5p mature miRNA
Sequence 7 - UCCACCUCCACAAGACACUUG - 27
Evidence experimental
Illumina [1]

Mature pab-miR11466b-3p

Accession MIMAT0057743
Description Picea abies pab-miR11466b-3p mature miRNA
Sequence 61 - GAACAAGUGUCUUAUGGAUGUUG - 83
Evidence experimental
unknown

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918