Stem-loop pab-MIR11512

Accession

MI0036977

Description

Picea abies pab-MIR11512 precursor miRNA

Sequence

acauagauucaagugcacaagaugagguaugaaaaacaccuagccaacucacagcaaguaaaccuagagcacaaugcuagagcuugaagcuaggucugucuuuaaUCCCCCAUCUUGUGCACUUGCgucucugu
(((.((((.(((((((((((((((.((.((.(((.(((((((((((((((..((((..................)))).))).)))..)))))))..)).))).)).)).))))))))))))))).)))).)))

Structure

   u    u               a  u  g   a  --       --   -   ac    aguaaacc 
aca agau caagugcacaagaug gg au aaa ac  accuagc  caa cuc  agca        u
||| |||| ||||||||||||||| || || ||| ||  |||||||  ||| |||  ||||         
ugu ucug GUUCACGUGUUCUAC CC Ua uuu ug  uggaucg  guu gag  ucgu        a
   c    C               C  C  a   c  uc       aa   c   -a    aacacgag 

Annotation confidence Not enough data

Genome context

MA_94119: 40179-40312 [-]

Mature pab-miR11512

• Accession: MIMAT0045075
• Description: Picea abies pab-miR11512 mature miRNA
• Sequence: 106 - UCCCCCAUCUUGUGCACUUGC - 126
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918