Stem-loop pab-MIR11515a

Accession

MI0036983

Description

Picea abies pab-MIR11515a precursor miRNA

Sequence

ugaaaccUCGAACAGCUACAGCUACAAUGucucuugcugaaagaaaaaaaugugcagauuuuaaauuuuauugauuucucagaauacacaaaaacagcggauuacauaaaaccagcacagaagacauuguagcugcgcuuguucaagguuuca
((((((((.(((((((..(((((((((((((((((((((.........(((.((((((..((((......))))..))).................))).))).........))))).)).)))))))))))))).)).))))).))))))))

Structure

        C     -  UA              -  -     aaagaaaaa   g   -----------------   uu    au 
ugaaaccU GAACA GC  CAGCUACAAUGucu cu ugcug         aau ugc                 aga  uuaa  u
|||||||| ||||| ||  |||||||||||||| || |||||         ||| |||                 |||  ||||   
acuuugga cuugu cg  gucgauguuacaga ga acgac         uua gcg                 ucu  aguu  u
        a     u  -c              a  c     caaaauaca   g   acaaaaacacauaagac   uu    au 

Annotation confidence Not enough data

Genome context

MA_474658: 4776-4928 [-]

Clustered miRNAs

1 other miRNA is < 10 kb from pab-MIR11515a

Mature pab-miR11515a

• Accession: MIMAT0045081
• Description: Picea abies pab-miR11515a mature miRNA
• Sequence: 8 - UCGAACAGCUACAGCUACAAUG - 29
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918