Stem-loop pab-MIR11466c

Accession

MI0036991

Description

Picea abies pab-MIR11466c precursor miRNA

Sequence

402471 reads, 13937.0 reads per million, 102 experiments

gcaauuacucuccacuUCUACAAGGCAUUUGUUCUCUgguuaaaggucuucugaaccauagAGAAUAAAUGUCCUGUGGAAGuugaaaguaaaugc
(((.(((((.((.(((((((((.((((((((((((((((((..((.....)).))))..)))))))))))))).))))))))).)).))))).)))

Structure

   a     c  c         A              --    aa  g 
gca uuacu uc acuUCUACA GGCAUUUGUUCUCU  gguu  ag u
||| ||||| || ||||||||| ||||||||||||||  ||||  || c
cgu aauga ag uGAAGGUGU CUGUAAAUAAGAga  ccaa  uc u
   a     a  u         C              ua    -g  u 

Annotation confidence High

Genome context

MA_91898: 24895-24990 [-]

Mature pab-miR11466c-5p

• Accession: MIMAT0045089
• Description: Picea abies pab-miR11466c-5p mature miRNA
• Sequence: 17 - UCUACAAGGCAUUUGUUCUCU - 37
• Evidence: experimental ; Illumina [1]

Mature pab-miR11466c-3p

• Accession: MIMAT0057754
• Description: Picea abies pab-miR11466c-3p mature miRNA
• Sequence: 62 - AGAAUAAAUGUCCUGUGGAAG - 82
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918