Accession
MI0036993
Description
Picea abies
pab-MIR11521 precursor miRNA
Sequence
2135
reads,
97.0
reads per million, 76 experiments
uguuucacgugagagaagcugcaUCUAGGGGCUCUUUAACAUCCuugcaaagugaacuuuaugaggacuugacuggacggaagcagauaauggauaacauugauacagggauaucgauguuaaaaggucuugucccgccuucucaaguucucauagUUUUAGAUGAUGUGGAUUCUgaugagcagcugcgggcauuauuuucaccguugaagga
..(((((((((((((.((.(((.(((((..((((.(((..((((...((....(((((..((((((((((((..((.(((.(..((((......(((((((((((......)))))))))))....))))..).)))))...)))))))))))))))))....))....))))..))).))))..))).))))))).)))))).)).)))))..
..(((((((((((((.((.(((.(((((..((((.(((..((((...((....(((((..((((((((((((..((.(((.(..((((......(((((((((((......)))))))))))....))))..).)))))...)))))))))))))))))....))....))))..))).))))..))).))))))).)))))).)).)))))..
Structure
ug - - a c a - GG U AC -uug aagu uu -cu a a gc aaugga ca uuuca cg ugagag ag ugc UC UAG GCUC UUA AUCC ca gaacu augaggacuuga gg cgg a agau uaacauugaua g ||||| || |||||| || ||| || ||| |||| ||| |||| || ||||| |||||||||||| || ||| | |||| ||||||||||| gaagu gc acuuuu uu acg gg guc cgag agU UAGG GU UUUga uacucuugaacu cc gcc u ucug auuguagcuau g ag u c a - - c ga u CU UGUA AGAU -- cuu - c gu --gaaa ag
Annotation confidence
Low
Do you think this miRNA is real?
Genome context
MA_10431676: 28668-28881 [+]
Clustered miRNAs
1 other miRNA is < 10 kb from pab-MIR11521
| Name | Accession | Chromosome | Start | End | Strand | Confidence |
|---|
Database links
Mature pab-miR11521-5p
| Accession | MIMAT0045091 |
| Description | Picea abies pab-miR11521-5p mature miRNA |
| Sequence | 24 - UCUAGGGGCUCUUUAACAUCC - 44 |
| Evidence |
experimental
Illumina [1] |
Mature pab-miR11521-3p
| Accession | MIMAT0057756 |
| Description | Picea abies pab-miR11521-3p mature miRNA |
| Sequence | 157 - UUUUAGAUGAUGUGGAUUCU - 176 |
| Evidence |
experimental
unknown |
References
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