Stem-loop pab-MIR11523a

Accession

MI0036995

Description

Picea abies pab-MIR11523a precursor miRNA

Sequence

72502 reads, 2779.0 reads per million, 101 experiments

gaguuccgaagcuucaucuUCUCAGCAGAUUUAAUCCCCGAcuuuuacauagccagagugcuuguaauaacaccagguuuguaggguuggggauuaaauugcucagAAGUUGAAGUCGGAAUUU
((((((((..((((((.(((((.(((((.((((((((((((((((.(((.((((.(.(((..........)))).)))))))))))))))))))))))))))).))))).))))))))))))))

Structure

        aa      u     C     A                u   u    a a   cuug 
gaguuccg  gcuuca cuUCU AGCAG UUUAAUCCCCGAcuuu aca agcc g gug    u
||||||||  |||||| ||||| ||||| |||||||||||||||| ||| |||| | |||     
UUUAAGGC  UGAAGU GAAga ucguu aaauuagggguuggga ugu uugg c cac    a
        --      U     c     -                -   -    a -   aaua 

Annotation confidence Low

Genome context

MA_38916: 43286-43409 [+]

Mature pab-miR11523a-5p

• Accession: MIMAT0045093
• Description: Picea abies pab-miR11523a-5p mature miRNA
• Sequence: 20 - UCUCAGCAGAUUUAAUCCCCGA - 41
• Evidence: experimental ; Illumina [1]

Mature pab-miR11523a-3p

• Accession: MIMAT0057757
• Description: Picea abies pab-miR11523a-3p mature miRNA
• Sequence: 107 - AAGUUGAAGUCGGAAUUU - 124
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918