Stem-loop pab-MIR11527

Accession

MI0037003

Description

Picea abies pab-MIR11527 precursor miRNA

Sequence

4584 reads, 146.0 reads per million, 78 experiments

cccacgcuguuuuguuuauaucuUCUGAGUAAAGGCACGUUCGGucauuacgagcgugaaauugccaaagaauuuuucgaaaugcccgcaCGUGCCUUUACUCAGAAGAUAuaaacaaguggg
(((((......(((((((((((((((((((((((((((((.(((.((((.(((....((((((.......))))))))).)))).))).))))))))))))))))))))))))))))))))))

Structure

     gcuguu                             U   u    a   gcgu      gc 
cccac      uuguuuauaucuUCUGAGUAAAGGCACGU CGG cauu cga    gaaauu  c
|||||      ||||||||||||||||||||||||||||| ||| |||| |||    ||||||  a
gggug      aacaaauAUAGAAGACUCAUUUCCGUGCa gcc guaa gcu    uuuuaa  a
     ------                             c   c    a   ----      ga 

Annotation confidence Medium

Genome context

MA_18404: 91751-91873 [-]

Mature pab-miR11527-5p

• Accession: MIMAT0045101
• Description: Picea abies pab-miR11527-5p mature miRNA
• Sequence: 24 - UCUGAGUAAAGGCACGUUCGG - 44
• Evidence: experimental ; Illumina [1]

Mature pab-miR11527-3p

• Accession: MIMAT0057762
• Description: Picea abies pab-miR11527-3p mature miRNA
• Sequence: 91 - CGUGCCUUUACUCAGAAGAUA - 111
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918