Stem-loop pab-MIR11528

Accession

MI0037004

Description

Picea abies pab-MIR11528 precursor miRNA

Sequence

67505 reads, 2622.0 reads per million, 102 experiments

gguugcgaaaaaaAAAUGGAGGAAUUGCCAAACAaauggccguaaguguaaaaguuacagcucauuguuauuugUCUGGCAACAUCCUCUAUUUCAuucuccagcc
(((((.((.((..((((((((((.((((((.(((((((((.((.(((((((...))))).)).)).))))))))).))))))..))))))))))..)).)))))))

Structure

     c  a  aa          -A      A         c  a  -     a 
gguug ga aa  AAAUGGAGGA  UUGCCA ACAaauggc gu ag uguaa  
||||| || ||  ||||||||||  |||||| ||||||||| || || ||||| a
ccgac cu uu  UUUAUCUCCU  AACGGU Uguuuauug ua uc acauu  
     -  c  AC          AC      C         u  c  g     g 

Annotation confidence High

Genome context

MA_56476: 3369-3474 [+]

Mature pab-miR11528-5p

• Accession: MIMAT0057763
• Description: Picea abies pab-miR11528-5p mature miRNA
• Sequence: 14 - AAAUGGAGGAAUUGCCAAACA - 34
• Evidence: experimental ; unknown

Mature pab-miR11528-3p

• Accession: MIMAT0045102
• Description: Picea abies pab-miR11528-3p mature miRNA
• Sequence: 75 - UCUGGCAACAUCCUCUAUUUCA - 96
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918