Stem-loop pab-MIR11529b

Accession

MI0037006

Description

Picea abies pab-MIR11529b precursor miRNA

Sequence

4302 reads, 417.0 reads per million, 93 experiments

guucuUCUUAUCUUUGAAAGUGCUAGCagauuuuauagcgauuuugucgaaguugcucagauaaaggucaaacaaaucguuguagaaauugcGAGCACUUCAAAGAGAAGAAGaac
(((((((((.((((((((.(((((.((((.((((((((((((((((((((......)).))))..........)))))))))))))).)))).))))))))))))).)))))))))

Structure

         A        A     A    a              ----------    -  ag 
guucuUCUU UCUUUGAA GUGCU GCag uuuuauagcgauuu          uguc ga  u
||||||||| |||||||| ||||| |||| ||||||||||||||          |||| ||   
caaGAAGAA AGAAACUU CACGA cguu aagauguugcuaaa          auag cu  u
         G        -     G    a              caaacuggaa    a  cg 

Annotation confidence Medium

Genome context

MA_368772: 5337-5452 [+]

Mature pab-miR11529b-5p

• Accession: MIMAT0045104
• Description: Picea abies pab-miR11529b-5p mature miRNA
• Sequence: 6 - UCUUAUCUUUGAAAGUGCUAGC - 27
• Evidence: experimental ; Illumina [1]

Mature pab-miR11529b-3p

• Accession: MIMAT0057765
• Description: Picea abies pab-miR11529b-3p mature miRNA
• Sequence: 93 - GAGCACUUCAAAGAGAAGAAG - 113
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918