miRBase entry: pab-MIR11532

Stem-loop pab-MIR11532


Accession
MI0037013
Description
Picea abies pab-MIR11532 precursor miRNA


Sequence

609120 reads, 25980.0 reads per million, 102 experiments
cuUGACAUUGUAAAAGACGGGAAUuaguagugguagccgccuaucccgaaagauucauugaggagaagcucucaauuauucuUCCCGUGUUUAACAAUGUCAAG
(((((((((((.(((.(((((((..((((((((.(((......((((((........))).)))...))).)).)))))).))))))).))).)))))))))))

Structure
           A   G       Uu      -  u   cgccua   -   aag 
cuUGACAUUGU AAA ACGGGAA  aguagu gg agc      ucc cga   a
||||||||||| ||| |||||||  |||||| || |||      ||| |||    
GAACUGUAACA UUU UGCCCUu  uuauua cu ucg      agg guu   u
           A   G       -c      a  c   ---aag   a   acu 


Annotation confidence High
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Genome context
MA_28910: 67659-67762 [+]

Database links

Mature pab-miR11532-5p

Accession MIMAT0045111
Description Picea abies pab-miR11532-5p mature miRNA
Sequence 3 - UGACAUUGUAAAAGACGGGAAU - 24
Evidence experimental
Illumina [1]

Mature pab-miR11532-3p

Accession MIMAT0057769
Description Picea abies pab-miR11532-3p mature miRNA
Sequence 83 - UCCCGUGUUUAACAAUGUCAAG - 104
Evidence experimental
unknown

References

  1. PubMed ID: 26318183
    Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
    "Xia R, Xu J, Arikit S, Meyers BC"
    "Mol Biol Evol (2015) 32:2905-2918