Stem-loop pab-MIR11487b

Accession

MI0037016

Description

Picea abies pab-MIR11487b precursor miRNA

Sequence

1298076 reads, 52263.0 reads per million, 102 experiments

gaagaggaggcacacUGAGAAGGCGAUCAACAUGACaaggauucauugcugcugcggcugaaugauuuugugguCAUAUUGAUCGCCUUUUCAGUcugccucuuauc
....((((((((.(((((((((((((((((.(((((..(((.(((((.(.((....)).)))))).)))...))))).))))))))))))))))).))))))))...

Structure

gaag        c                 C     -aa   u     g u  u 
    aggaggca acUGAGAAGGCGAUCAA AUGAC   gga ucauu c gc g
    |||||||| ||||||||||||||||| |||||   ||| ||||| | ||  
    uucuccgu UGACUUUUCCGCUAGUU UACug   uuu aguaa g cg c
-cua        c                 A     gug   u     - u  g 

Annotation confidence High

Genome context

MA_57341: 7404-7510 [-]

Mature pab-miR11487b-5p

• Accession: MIMAT0045114
• Description: Picea abies pab-miR11487b-5p mature miRNA
• Sequence: 16 - UGAGAAGGCGAUCAACAUGAC - 36
• Evidence: experimental ; Illumina [1]

Mature pab-miR11487b-3p

• Accession: MIMAT0057772
• Description: Picea abies pab-miR11487b-3p mature miRNA
• Sequence: 75 - CAUAUUGAUCGCCUUUUCAGU - 95
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918