Stem-loop pab-MIR11534

Accession

MI0037019

Description

Picea abies pab-MIR11534 precursor miRNA

Sequence

85707 reads, 1789.0 reads per million, 87 experiments

ugugcgacagaaugcuuAACCUCGCCAACAAUCUCACCaccgaucaugugaauaucuaagaauaggaggUGAGAUUGUUGGAGAGGUUCAgcauuuaucugcaca
((((((...(((((((.((((((.((((((((((((((.((.((..(..((...))..)..)).)).)))))))))))))).)))))).)))))))...))))))

Structure

      aca       u      G              a  g  ca gu  a 
ugugcg   gaaugcu AACCUC CCAACAAUCUCACC cc au  u  ga  
||||||   ||||||| |||||| |||||||||||||| || ||  |  || u
acacgu   uuuacgA UUGGAG GGUUGUUAGAGUgg gg ua  a  cu  
      cua       C      A              a  a  ag au  a 

Annotation confidence High

Genome context

MA_90416: 36356-36460 [-]

Mature pab-miR11534-5p

• Accession: MIMAT0057775
• Description: Picea abies pab-miR11534-5p mature miRNA
• Sequence: 18 - AACCUCGCCAACAAUCUCACC - 38
• Evidence: experimental ; unknown

Mature pab-miR11534-3p

• Accession: MIMAT0045117
• Description: Picea abies pab-miR11534-3p mature miRNA
• Sequence: 70 - UGAGAUUGUUGGAGAGGUUCA - 90
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918