Stem-loop pab-MIR11539b

Accession

MI0037030

Description

Picea abies pab-MIR11539b precursor miRNA

Sequence

1870 reads, 257.0 reads per million, 64 experiments

uugaauauUGCGGCAGGUAGAUUAUAGGUuguuggaucugaaaacaauucagauccaauggccuauAAUCUAGCUGCCGCAGUUUUCag
.((((.((((((((((.(((((((((((((((((((((((((.....))))))))))))))))))))))))).)))))))))).)))).

Structure

u    u          G                         a 
 ugaa auUGCGGCAG UAGAUUAUAGGUuguuggaucugaa a
 |||| |||||||||| ||||||||||||||||||||||||| c
 aCUU UGACGCCGUC AUCUAAuauccgguaaccuagacuu a
g    U          G                         a 

Annotation confidence Low

Genome context

MA_50859: 14120-14208 [+]

Mature pab-miR11539b-5p

• Accession: MIMAT0045128
• Description: Picea abies pab-miR11539b-5p mature miRNA
• Sequence: 9 - UGCGGCAGGUAGAUUAUAGGU - 29
• Evidence: experimental ; Illumina [1]

Mature pab-miR11539b-3p

• Accession: MIMAT0057782
• Description: Picea abies pab-miR11539b-3p mature miRNA
• Sequence: 67 - AAUCUAGCUGCCGCAGUUUUC - 87
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918