Stem-loop pab-MIR3627e

Accession

MI0037031

Description

Picea abies pab-MIR3627e precursor miRNA

Sequence

639 reads, 51.0 reads per million, 32 experiments

guuucgUGCGUAGACGAGAUGGCACAGUccuuauuuauccucuuuacucacucaguuucauaugaaucaguaagagauguaagagggcUGUGUCAUCUCGCUGCGCaucauau
.....((((((((.((((((((((((((((((...((((.((((.(((...(((........)))...)))))))))))...)))))))))))))))))))))))))).....

Structure

guuuc        A                  auu    c    u   cac   guu 
     gUGCGUAG CGAGAUGGCACAGUccuu   uauc ucuu acu   uca   u
     |||||||| ||||||||||||||||||   |||| |||| |||   |||    
     uaCGCGUC GCUCUACUGUGUcgggag   guag agaa uga   agu   c
uauac        -                  aau    -    -   cua   aua 

Annotation confidence Low

Genome context

MA_536155: 3335-3447 [-]

Mature pab-miR3627e-5p

• Accession: MIMAT0045129
• Description: Picea abies pab-miR3627e-5p mature miRNA
• Sequence: 7 - UGCGUAGACGAGAUGGCACAGU - 28
• Evidence: experimental ; Illumina [1]

Mature pab-miR3627e-3p

• Accession: MIMAT0057783
• Description: Picea abies pab-miR3627e-3p mature miRNA
• Sequence: 89 - UGUGUCAUCUCGCUGCGC - 106
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918