Stem-loop pab-MIR11544

Accession

MI0037033

Description

Picea abies pab-MIR11544 precursor miRNA

Sequence

guggggcagguUGGAGCUGUUGUCACUCCACUccauaucuucccuguucuagucuguucacggggcauugaguugacccaaagauauggaguggggugacaacagcuccaacuuccccau
((((((.((((((((((((((((((((((((((((((((((((((((.(......)...))))))...............))))))))))))))))))))))))))))))))))))))))

Structure

      c                                  ---------------      --u ua 
gugggg agguUGGAGCUGUUGUCACUCCACUccauaucuu               cccugu   c  g
|||||| ||||||||||||||||||||||||||||||||||               ||||||   |   
uacccc uucaaccucgacaacaguggggugagguauagaa               ggggca   g  u
      -                                  acccaguugaguuac      cuu uc 

Annotation confidence Not enough data

Genome context

MA_185559: 13587-13706 [-]

Clustered miRNAs

2 other miRNAs are < 10 kb from pab-MIR11544

Mature pab-miR11544

• Accession: MIMAT0045131
• Description: Picea abies pab-miR11544 mature miRNA
• Sequence: 12 - UGGAGCUGUUGUCACUCCACU - 32
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918