Stem-loop pab-MIR3627j

Accession

MI0037034

Description

Picea abies pab-MIR3627j precursor miRNA

Sequence

uuucUGGCGCAGAAGAAAUGACACUGuagucauauauccucaucauucaaucaauuugagaugacgaaggaauaaaauguaugaaggcagugucauuucgcugcaccugaaa
.(((.((.((((..(((((((((((((..((((((((((((.((((((((.....)))).)))).).))))......)))))))..))))))))))))).)))).)).))).

Structure

u   U  C    AA             ag       ------    - a    -    u 
 uuc GG GCAG  GAAAUGACACUGu  ucauaua      uccu c ucau ucaa c
 ||| || ||||  |||||||||||||  |||||||      |||| | |||| |||| a
 aag cc cguc  cuuuacugugacg  aguaugu      agga g agua aguu a
a   u  a    -g             ga       aaaaua    a c    g    u 

Annotation confidence Not enough data

Genome context

MA_551792: 3359-3470 [+]

Mature pab-miR3627j

• Accession: MIMAT0045132
• Description: Picea abies pab-miR3627j mature miRNA
• Sequence: 5 - UGGCGCAGAAGAAAUGACACUG - 26
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918