Stem-loop pab-MIR11545

Accession

MI0037035

Description

Picea abies pab-MIR11545 precursor miRNA

Sequence

ggcuaacugUGGGCGUUUGGUGAUAACAUCaguugcgggaucgaacuggcccguaucccacgcucucauuugaggagccuuuaaucccgcaauuaauguuaucaccaaacaaccacaauuaacu
...(((.(((((..(((((((((((((((.(((((((((((.(((..(((((.((...............)).)).)))))).))))))))))).)))))))))))))))..))))).)))...

Structure

ggc   c     GC               C           c   cu   -  g  ucccac 
   uaa ugUGG  GUUUGGUGAUAACAU aguugcgggau gaa  ggc cc ua      g
   ||| |||||  ||||||||||||||| ||||||||||| |||  ||| || ||      c
   auu acacc  caaaccacuauugua uuaacgcccua uuu  ccg gg gu      u
uca   a     aa               a           a   --   a  a  uuacuc 

Annotation confidence Not enough data

Genome context

MA_733800: 3376-3499 [-]

Mature pab-miR11545

• Accession: MIMAT0045133
• Description: Picea abies pab-miR11545 mature miRNA
• Sequence: 10 - UGGGCGUUUGGUGAUAACAUC - 30
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918