Stem-loop pab-MIR11546a

Accession

MI0037036

Description

Picea abies pab-MIR11546a precursor miRNA

Sequence

caaccacuacaaacuggaaucUGGUACGGGUUGAAGUAGCACCucucccuggcuuggcugcugcuucuuaucacaggauccguugcaauggccaaaugagguguuauuucaaccccuaccaggcuccaauaggguug
(((((.(((.....((((.(((((((.((((((((((((((((((....(((((..((.((.(.((((......)))).).)).))...)))))...)))))))))))))))))).))))))).)))).))))))))

Structure

     a   caaac    a       C                  uccc     -ug  u  u c    ua 
caacc cua     ugga ucUGGUA GGGUUGAAGUAGCACCuc    uggcu   gc gc g uucu  u
||||| |||     |||| ||||||| ||||||||||||||||||    |||||   || || | ||||   
guugg gau     accu ggaccau cccaacuuuauuguggag    accgg   cg ug c agga  c
     -   ----a    c       c                  -uaa     uaa  u  c u    ca 

Annotation confidence Not enough data

Genome context

MA_181272: 16768-16904 [-]

Mature pab-miR11546a

• Accession: MIMAT0045134
• Description: Picea abies pab-miR11546a mature miRNA
• Sequence: 22 - UGGUACGGGUUGAAGUAGCACC - 43
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918