Stem-loop pab-MIR11554

Accession

MI0037048

Description

Picea abies pab-MIR11554 precursor miRNA

Sequence

uuuggucaucaauaaacaguuugcuguagaguuuuuaagauuaagguaaaguuuuuaagauuaagacaggugguauauauacuaucugauagaucccaacauauauaucaaaauaauuugacaguauauauacauuacaagccgcaguagucUUAAAGAUUCUGCAGCAAACUacuuauugauggccggg
.((((((((((((((..((((((((((((((((((((((((((..((...((((.(((((((....(((((((((....)))))))))...)))).....((((((((((((....)))))...)))))))...))).)))).))..))))))))))))))))))))))))))..)))))))))))))).

Structure

u              ac                          ag  aaa    u   ---------------------------------------    aaga         u 
 uuggucaucaauaa  aguuugcuguagaguuuuuaagauua  gu   guuu uaa                                       gauu    cagguggua a
 ||||||||||||||  ||||||||||||||||||||||||||  ||   |||| |||                                       ||||    |||||||||  
 ggccgguaguuauu  UCAAACGACGUCUUAGAAAUUcugau  cg   cgaa auu                                       cuag    gucuaucau u
g              ca                          ga  --c    c   acauauauaugacaguuuaauaaaacuauauauacaacc    -aua         a 

Annotation confidence Not enough data

Genome context

MA_10430098: 36319-36508 [-]

Mature pab-miR11554

• Accession: MIMAT0045146
• Description: Picea abies pab-miR11554 mature miRNA
• Sequence: 153 - UUAAAGAUUCUGCAGCAAACU - 173
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918