Stem-loop pab-MIR11557

Accession

MI0037052

Description

Picea abies pab-MIR11557 precursor miRNA

Sequence

uuauuuguaucaugucugaucucaaauccuggaucaguacaguacccggagauauuuaaacauguagagaugcacaauuuuacuuauacuagcucugaucUUAGAUUCCGGAUCAACGUAGCgguga
....((((...((((.((((((..((((..(((((((..(((((....(((((.......(((......)))....))))).....)))).)..)))))))..))))..)))))))))).))))...

Structure

uuau    auc    c      ca    cu       ua -    -cccg     auuuaaa   gu 
    uugu   augu ugaucu  aauc  ggaucag  c agua     gagau       cau  a
    ||||   |||| ||||||  ||||  |||||||  | ||||     |||||       |||   
    ggCG   UGCA ACUAGG  UUAG  Ucuaguc  g ucau     uuuua       gua  g
-agu    --A    -      CC    AU       uc a    auuca     ---acac   ga 

Annotation confidence Not enough data

Genome context

MA_394405: 1798-1924 [-]

Mature pab-miR11557

• Accession: MIMAT0045150
• Description: Picea abies pab-miR11557 mature miRNA
• Sequence: 101 - UUAGAUUCCGGAUCAACGUAGC - 122
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918