Stem-loop pab-MIR11559

Accession

MI0037054

Description

Picea abies pab-MIR11559 precursor miRNA

Sequence

auggcggccguagaagaugaugcagauaagaaauacaugauucugugcacgcugauugcccuugccacugccguuuauucgauaguuuaugaguucuuaccccaugggaaguaccagcuucaagcagucuacguugcggugcUUAUUAUUCUCUUGAUGGCCCcuau
..((.(((((((((.(((((((((((...............)))))(((((..((((((....((.((((.((......)).))))...((.((.(((.(((...)))))).)))))).....))))))..)).))).......)))))).)))..))))))))...

Structure

-au  c      --   a      gcagauaagaaauacaugauucugu   -  cu      -ccuu  cacugccguuuauucgauaguuua  a  u   a   c 
   gg ggccgu  aga gaugau                         gca cg  gauugc     gc                        ug gu cuu ccc  
   || ||||||  ||| ||||||                         ||| ||  ||||||     ||                        || || ||| ||| a
   cC CCGGUA  UCU UUAUUA                         cgu gc  cugacg     cg                        ac ca gaa ggg  
uau  -      GU   C      ------------------UUcgugg   u  au      aacuu  ------------------------  -  u   -   u 

Annotation confidence Not enough data

Genome context

MA_256013: 2742-2908 [-]

Mature pab-miR11559

• Accession: MIMAT0045152
• Description: Picea abies pab-miR11559 mature miRNA
• Sequence: 143 - UUAUUAUUCUCUUGAUGGCCC - 163
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918