Stem-loop pab-MIR11562c

Accession

MI0037060

Description

Picea abies pab-MIR11562c precursor miRNA

Sequence

gccaugccagcaaUUCUGAUAAUGCUUCACCCUCAaugcccaauuuuaauuacaccaauuucacuucugcacagauugggcagugagggugaagcauuacagaauuaguggcagcgc
((..(((((..(((((((.((((((((((((((((.((((((((((..........................)))))))))).)))))))))))))))))))))))..)))))))..

Structure

--  ca     gc       A                a          uaauuacaccaa 
  gc  ugcca  aaUUCUG UAAUGCUUCACCCUCA ugcccaauuu            u
  ||  |||||  ||||||| |||||||||||||||| ||||||||||             
  cg  acggu  uuaagac auuacgaagugggagu acggguuaga            u
cg  --     ga       -                g          cacgucuucacu 

Annotation confidence Not enough data

Genome context

MA_8080030: 1929-2045 [+]

Mature pab-miR11562c

• Accession: MIMAT0045158
• Description: Picea abies pab-miR11562c mature miRNA
• Sequence: 14 - UUCUGAUAAUGCUUCACCCUCA - 35
• Evidence: experimental ; Illumina [1]

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918