Stem-loop pab-MIR3693d

Accession

MI0037062

Description

Picea abies pab-MIR3693d precursor miRNA

Sequence

20030 reads, 788.0 reads per million, 99 experiments

ggugcucUUGAACUGCUUAUAGAUGGGCgcugcucagaugccuuaaucaaacacuucggcagaucuguuuguugaauauacaagcccccauuaaugagcaaaagcCCAUCUAUCAGCAGUUCAAGAccacc
((((.((((((((((((.((((((((((..((((((((((..((((.((((((..((....))..)))))))))).............))))..))))))...)))))))))).)))))))))))).))))

Structure

    c            U          -gc      --    -----------cc    u      cu  g 
ggug ucUUGAACUGCU AUAGAUGGGC   ugcuca  gaug             uuaa caaaca  uc g
|||| |||||||||||| ||||||||||   ||||||  ||||             |||| ||||||  ||  
ccac AGAACUUGACGA UAUCUACCcg   acgagu  uuac             aguu guuugu  ag c
    c            C          aaa      aa    ccccgaacauaua    -      cu  a 

Annotation confidence High

Genome context

MA_4731385: 149-279 [+]

Mature pab-miR3693d-5p

• Accession: MIMAT0045160
• Description: Picea abies pab-miR3693d-5p mature miRNA
• Sequence: 8 - UUGAACUGCUUAUAGAUGGGC - 28
• Evidence: experimental ; Illumina [1]

Mature pab-miR3693d-3p

• Accession: MIMAT0057806
• Description: Picea abies pab-miR3693d-3p mature miRNA
• Sequence: 106 - CCAUCUAUCAGCAGUUCAAGA - 126
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918