Stem-loop pab-MIR3693e

Accession

MI0037063

Description

Picea abies pab-MIR3693e precursor miRNA

Sequence

20006 reads, 787.0 reads per million, 99 experiments

ggugcucUUGAACUGCUUAUAGAUGGGCgcuucucagaggccuuaaucaaacacuuuggcauaucuguuuguugaauauacaagcccccauuaaugagcaaaaacCCAUCUAUCAGCAGUUCAAGAccacc
((((.((((((((((((.(((((((((...((((((...(((...............)))......((((((.......)))))).........)))).))...))))))))).)))))))))))).))))

Structure

    c            U         Cgc  -    gaggccuuaaucaaacacuuuggcauaucu      ug 
ggug ucUUGAACUGCU AUAGAUGGG   uu cuca                              guuugu  a
|||| |||||||||||| |||||||||   || ||||                              ||||||  a
ccac AGAACUUGACGA UAUCUACCc   aa gagu                              cgaaca  u
    c            C         aaa  c    ---------------------aauuacccc      ua 

Annotation confidence High

Genome context

MA_6430996: 344-474 [+]

Mature pab-miR3693e-5p

• Accession: MIMAT0045161
• Description: Picea abies pab-miR3693e-5p mature miRNA
• Sequence: 8 - UUGAACUGCUUAUAGAUGGGC - 28
• Evidence: experimental ; Illumina [1]

Mature pab-miR3693e-3p

• Accession: MIMAT0057807
• Description: Picea abies pab-miR3693e-3p mature miRNA
• Sequence: 106 - CCAUCUAUCAGCAGUUCAAGA - 126
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918