Stem-loop pab-MIR3693f

Accession

MI0037064

Description

Picea abies pab-MIR3693f precursor miRNA

Sequence

19949 reads, 787.0 reads per million, 99 experiments

ucUUGAACUGCUUAUAGAUGGGCgcugcucagaggccuuaaucaaacacuucggcagaucuguuuguugaauauacaagcccccauuaaugagaaaaaacCCAUCUAUCAGCAGUUCAAGA
((((((((((((.(((((((((.....(((((.(((.((((.((((((..((....))..))))))))))........))).)......))))......))))))))).))))))))))))

Structure

            U         -Cgcug    ------ a   -------c    u      cu  g 
ucUUGAACUGCU AUAGAUGGG      cuca      g ggc        uuaa caaaca  uc g
|||||||||||| |||||||||      ||||      | |||        |||| ||||||  ||  
AGAACUUGACGA UAUCUACCc      gagu      c ccg        aguu guuugu  ag c
            C         aaaaaa    aauuac c   aacauaua    -      cu  a 

Annotation confidence High

Genome context

MA_7476655: 24-144 [-]

Mature pab-miR3693f-5p

• Accession: MIMAT0045162
• Description: Picea abies pab-miR3693f-5p mature miRNA
• Sequence: 3 - UUGAACUGCUUAUAGAUGGGC - 23
• Evidence: experimental ; Illumina [1]

Mature pab-miR3693f-3p

• Accession: MIMAT0057808
• Description: Picea abies pab-miR3693f-3p mature miRNA
• Sequence: 101 - CCAUCUAUCAGCAGUUCAAGA - 121
• Evidence: experimental ; unknown

References

1. PubMed ID: 26318183
   Extensive Families of miRNAs and PHAS Loci in Norway Spruce Demonstrate the Origins of Complex phasiRNA Networks in Seed Plants
   "Xia R, Xu J, Arikit S, Meyers BC"
   "Mol Biol Evol (2015) 32:2905-2918